cokelaer / sequana / 6469580446
74%
master: 67%

LAST BUILD BRANCH: dev
DEFAULT BRANCH: master
Ran
Jobs 1
Files 159
Run time 5s
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Rst
coverage: 73.807% (+1.6%) from 72.208%
6469580446

push

github

cokelaer 
Fix CI

13083 of 17726 relevant lines covered (73.81%)

0.74 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
96.67
 0.0% sequana/codon.py
1
97.92
 -2.08% sequana/datatools.py
1
99.51
 -0.49% sequana/fasta.py
1
87.38
 -0.32% sequana/gff3.py
1
93.33
 0.0% sequana/lazyimports.py
1
98.25
 -1.75% sequana/modules_report/bamqc.py
1
98.11
 0.0% sequana/modules_report/pacbio_input_bam.py
1
98.51
 0.0% sequana/summary.py
1
96.3
 0.0% sequana/viz/anova.py
2
93.33
 0.0% sequana/gtf_fixer.py
2
80.49
 0.0% sequana/modules_report/variant_calling.py
2
50.0
 0.0% sequana/multiqc/config.py
2
96.15
 0.0% sequana/plots/canvasjs_base.py
2
87.5
 0.0% sequana/sniffer.py
2
96.15
 0.0% sequana/snpeff.py
3
96.04
 0.0% sequana/macs3.py
3
89.74
 0.0% sequana/multiqc/quality_control.py
3
85.71
 0.0% sequana/scripts/main/ribodesigner.py
3
93.75
 0.0% sequana/utils/tree.py
4
97.47
 0.0% sequana/iem.py
4
91.67
 5.0% sequana/viz/clusterisation.py
5
96.12
 -1.57% sequana/cigar.py
5
95.29
 -0.03% sequana/databases.py
5
94.31
 0.0% sequana/utils/datatables_js.py
5
90.24
 0.0% sequana/vcftools.py
6
92.77
 -0.09% sequana/multiqc/kraken.py
6
89.42
 0.0% sequana/multiqc/pacbio_qc.py
6
0.0
 0.0% sequana/scripts/main/enrichment_uniprot.py
6
89.84
 -0.11% sequana/taxonomy.py
6
84.31
 0.0% sequana/viz/volcano.py
7
75.89
 -0.04% sequana/pacbio.py
7
78.13
 0.0% sequana/viz/boxplot.py
7
21.43
 0.0% sequana/viz/plotly.py
8
90.29
 0.0% sequana/fastqc.py
8
86.84
 0.0% sequana/freebayes_vcf_filter.py
8
59.52
 0.0% sequana/genbank.py
8
90.14
 -0.57% sequana/multiqc/coverage.py
8
0.0
 0.0% sequana/scripts/main/fasta.py
9
93.33
 0.0% sequana/fasta_gff_correction.py
9
56.92
 -0.33% sequana/find_motif.py
9
90.68
 -0.08% sequana/multiqc/bamtools_stats.py
9
95.28
 0.0% sequana/phantom.py
9
55.38
 0.0% sequana/scripts/main/lane_merging.py
9
94.84
 0.0% sequana/viz/heatmap.py
10
86.75
 0.0% sequana/enrichment/panther.py
10
93.77
 -0.02% sequana/modules_report/cutadapt.py
12
57.07
 0.0% sequana/modules_report/summary.py
12
0.0
 0.0% sequana/multiqc/plots.py
13
0.0
 0.0% sequana/modules_report/trf.py
13
92.13
 -0.03% sequana/tools.py
14
97.2
 -0.39% sequana/fastq.py
17
62.69
 0.0% sequana/enrichment/uniprot_enrichment.py
18
80.0
 0.0% sequana/scripts/coverage.py
20
77.55
 0.0% sequana/enrichment/quickgo.py
21
77.89
 -0.12% sequana/mixture.py
21
70.9
 0.0% sequana/modules_report/multi_summary.py
22
66.85
 0.0% sequana/featurecounts.py
23
89.24
 0.0% sequana/modules_report/coverage.py
24
0.0
 0.0% sequana/multiqc/isoseq_qc.py
24
70.0
 -0.45% sequana/viz/dendogram.py
25
0.0
 0.0% sequana/multiqc/laa.py
25
0.0
 0.0% sequana/multiqc/pacbio_amplicon.py
26
93.75
 -0.03% sequana/sequence.py
27
55.28
 0.0% sequana/demultiplex.py
27
59.34
 0.0% sequana/scripts/taxonomy.py
29
75.55
 0.0% sequana/compare.py
32
25.35
 0.0% sequana/modules_report/fastq_stats.py
33
0.0
 0.0% sequana/salmon.py
37
95.08
 -0.02% sequana/bedtools.py
42
18.26
 0.0% sequana/modules_report/kraken.py
48
0.0
 0.0% sequana/scripts/substractor.py
49
17.97
 0.0% sequana/pacbio_amplicon.py
53
80.84
 5.62% sequana/enrichment/kegg.py
56
0.0
 0.0% sequana/multiqc/isoseq.py
67
0.0
 0.0% sequana/laa.py
85
81.07
 -0.1% sequana/bamtools.py
89
78.36
 45.56% sequana/rnadiff.py
124
73.24
 0.0% sequana/kraken/analysis.py
124
0.0
 0.0% sequana/modules_report/rnadiff.py
Jobs
ID Job ID Ran Files Coverage
1 6469580446.1 159
73.81
Source Files on build 6469580446