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Added Batching Functionality to Pixel Mask Generation and FOV Saving (#643)

* batching generate_pixel_cluster_mask

* added batch_size arg to the pixel_clustering template notebook

* added `batch_size` to save_fov_images

* fixed test_save_fov_images

* added generate and save funcs

* added tests

* added func to pixel_clustering nb

* formatting, nb test tag fix

* sphinx fix #1

* sphinx - skeleton docstring

* sphinx - skeleton docstring 2

* sphinx

* docstring fix test

* docstring fix test2

* pycodestyle

* pycodestyle

* refactored assert(...) to assert ...

* docstring fix

* debugging dir issue

* fixed loading the masks

* fixed mantis project path issue with batched masks

* variable name change

* removed dead code

20 of 20 new or added lines in 2 files covered. (100.0%)

2738 of 2909 relevant lines covered (94.12%)

0.94 hits per line