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Ran 10 Aug 2022 11:43PM UTC

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Committed 10 Aug 2022 11:43PM UTC coverage: 94.122% (+0.04%) from 94.081%

Job # MPLBACKEND=Agg

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push

travis-ci-com

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web-flow

Commit Message

Added Batching Functionality to Pixel Mask Generation and FOV Saving (#643)

* batching generate_pixel_cluster_mask

* added batch_size arg to the pixel_clustering template notebook

* added `batch_size` to save_fov_images

* fixed test_save_fov_images

* added generate and save funcs

* added tests

* added func to pixel_clustering nb

* formatting, nb test tag fix

* sphinx fix #1

* sphinx - skeleton docstring

* sphinx - skeleton docstring 2

* sphinx

* docstring fix test

* docstring fix test2

* pycodestyle

* pycodestyle

* refactored assert(...) to assert ...

* docstring fix

* debugging dir issue

* fixed loading the masks

* fixed mantis project path issue with batched masks

* variable name change

* removed dead code

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angelolab / ark-analysis / 5763 / 1
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master: 94%

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angelolab / ark-analysis / 5763 / 1
94%
master: 94%

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