2134
79%
master: 81%

Ran 27 Aug 2015 06:52PM UTC

Jobs 3

Files 450

Run time 8min

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Build # 2134

Build Type

push

travis-ci

Committed by

droazen

Commit Message

Add integration tests showing that bai-indexed traversal by intervals on cram files works

-Add tests with an input cram and an output sam, bam, or cram with various intervals
 provided to the -L argument, and check that we get the expected read in the output
 for each set of intervals.

-Generalize CRAMReferenceIntegrationTest to CRAMSupportIntegrationTest, and centralize
 cram test data in the engine package.

Resolves #675

Run Details

19500 of 24636 relevant lines covered (79.15%)

1.73 hits per line

Jobs

ID	Job ID	Ran	Coverage
1	2134.1 (CLOUD=mandatory)	27 Aug 2015 06:53PM UTC	18.32	Travis Job 2134.1
3	2134.3 (CLOUD=false)	27 Aug 2015 06:52PM UTC	77.28	Travis Job 2134.3
5	2134.5 (DATAFLOW_RUNNER=SparkPipelineRunner CLOUD=false)	27 Aug 2015 07:00PM UTC	77.27	Travis Job 2134.5

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