2083
79%
master: 81%

Ran 25 Aug 2015 10:06PM UTC

Jobs 3

Files 450

Run time 10min

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Build # 2083

Build Type

push

travis-ci

Committed by

droazen

Commit Message

Add integration tests showing that bai-indexed traversal by intervals on cram files works

-Add tests with an input cram and an output sam, bam, or cram with various intervals
 provided to the -L argument, and check that we get the expected read in the output
 for each set of intervals.

-Generalize CRAMReferenceIntegrationTest to CRAMSupportIntegrationTest, and centralize
 cram test data in the engine package.

Resolves #675

Run Details

19508 of 24629 relevant lines covered (79.21%)

1.73 hits per line

Jobs

ID	Job ID	Ran	Coverage
1	2083.1 (CLOUD=mandatory)	25 Aug 2015 10:16PM UTC	18.35	Travis Job 2083.1
3	2083.3 (CLOUD=false)	25 Aug 2015 10:06PM UTC	77.34	Travis Job 2083.3
5	2083.5 (DATAFLOW_RUNNER=SparkPipelineRunner CLOUD=false)	25 Aug 2015 10:06PM UTC	77.33	Travis Job 2083.5

Source Files on build 2083

Coverage	∆	File	Lines	Relevant	Covered	Missed	Hits/Line

broadinstitute / hellbender / 2083
79%
master: 81%

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broadinstitute / hellbender / 2083 79% master: 81%

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Source Files on build 2083

broadinstitute / hellbender / 2083
79%
master: 81%

README BADGES
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