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angelolab / segmentation / 568
81%

Build:
DEFAULT BRANCH: master
Ran 13 Jul 2020 10:47PM UTC
Jobs 1
Files 26
Run time 7s
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Compartment extraction refactor (#123)

* nuclear label helper function

* test function for nuclear id finder

* switched to pandas array for regionprops

* testing of signal extraction

* moved regionprops inside helper function

* helper function for normalization

* first pass at compartment-specific CSV labels

* testing for full function

* pep8

* better docstrings and default values

* fancy formatting

* move error checking to main function

1094 of 1840 relevant lines covered (59.46%)

0.59 hits per line

Jobs
ID Job ID Ran Files Coverage
1 568.1 (MPLBACKEND=Agg) 13 Jul 2020 10:47PM UTC 0
59.46
Travis Job 568.1
Source Files on build 568
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