broadinstitute / viral-ngs / 123
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DEFAULT BRANCH: master
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Jobs 2
Files 42
Run time 7min
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exclude secondary alignments and unaligned reads in flagstat output from WDLs (#914)

* in WDLs calling samtools flagstat, exclude secondary alignments and unaligned reads

* indent

396 of 2717 branches covered (14.57%)

2114 of 6667 relevant lines covered (31.71%)

1.04 hits per line

Jobs
ID Job ID Ran Files Coverage
5 123.5 (TRAVIS_JOB=test_py36) 0
74.09
 Travis Job 123.5
6 123.6 (TRAVIS_JOB=test_snakemake) 0
31.71
 Travis Job 123.6
Source Files on build 123
Detailed source file information is not available for this build.