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ga4gh / dockstore / 7149
75%

Build:
DEFAULT BRANCH: develop
Ran 22 Jan 2019 10:45PM UTC
Jobs 5
Files 200
Run time 29min
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Add error message if malformed input file (json/yaml)


#1948 

* refactor convertYAMLtoJSON() from workflowClient to abstractEntryClient: renamed method fileToJSON()

* add method preValidateLaunchArguments() to check input file for syntax errors in json or yaml

* add catch ParserException if input file has invalid syntax, outputs new error message

* add tests for checking input file in both workflows and tools

* change IOException to catch silently, write to error.log and let existing error handling take precedence

9233 of 13916 relevant lines covered (66.35%)

1.79 hits per line

Jobs
ID Job ID Ran Files Coverage
10 7149.10 (TESTING_PROFILE=unit-tests) 22 Jan 2019 10:45PM UTC 0
10.69
Travis Job 7149.10
11 7149.11 (TESTING_PROFILE=integration-tests) 22 Jan 2019 11:06PM UTC 0
12.34
Travis Job 7149.11
12 7149.12 (TESTING_PROFILE=tool-integration-tests) 22 Jan 2019 11:07PM UTC 0
43.09
Travis Job 7149.12
13 7149.13 (TESTING_PROFILE=workflow-integration-tests) 22 Jan 2019 11:09PM UTC 0
42.71
Travis Job 7149.13
14 7149.14 (TESTING_PROFILE=other-integration-tests) 22 Jan 2019 11:14PM UTC 0
46.98
Travis Job 7149.14
Source Files on build 7149
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