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ga4gh / dockstore / 7149 / 12
75%
develop: 75%

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DEFAULT BRANCH: develop
Ran 22 Jan 2019 11:07PM UTC
Files 200
Run time 19s
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22 Jan 2019 09:30PM UTC coverage: 43.087%. Remained the same
TESTING_PROFILE=tool-integration-tests

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Add error message if malformed input file (json/yaml)


#1948 

* refactor convertYAMLtoJSON() from workflowClient to abstractEntryClient: renamed method fileToJSON()

* add method preValidateLaunchArguments() to check input file for syntax errors in json or yaml

* add catch ParserException if input file has invalid syntax, outputs new error message

* add tests for checking input file in both workflows and tools

* change IOException to catch silently, write to error.log and let existing error handling take precedence

5996 of 13916 relevant lines covered (43.09%)

0.43 hits per line

Source Files on job 7149.12 (TESTING_PROFILE=tool-integration-tests)
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