broadinstitute / viral-ngs / 6750
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DEFAULT BRANCH: master
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Jobs 2
Files 41
Run time 9min
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assembly.py - added --alwaysSucceed option to SPAdes (#888)

assembly.py - added --alwaysSucceed option to SPAdes; made always-succeed the default for demux_plus.wdl workflow (for #886)

390 of 2655 branches covered (14.69%)

10 of 10 new or added lines in 2 files covered. (100.0%)

2068 of 6437 relevant lines covered (32.13%)

1.03 hits per line

Jobs
ID Job ID Ran Files Coverage
5 6750.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util --cov file_utils") 0
73.15
 Travis Job 6750.5
6 6750.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util --cov file_utils") 0
32.13
 Travis Job 6750.6
Source Files on build 6750
Detailed source file information is not available for this build.