broadinstitute / viral-ngs / 6736
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DEFAULT BRANCH: master
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Jobs 2
Files 41
Run time 9min
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assembly.assemble_spades: added option to drop contigs shorter than given length. (#889)

assembly.assemble_spades: added option to drop contigs shorter than given length (for #874)

390 of 2651 branches covered (14.71%)

12 of 12 new or added lines in 2 files covered. (100.0%)

2068 of 6431 relevant lines covered (32.16%)

1.03 hits per line

Jobs
ID Job ID Ran Files Coverage
5 6736.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util --cov file_utils") 0
73.14
 Travis Job 6736.5
6 6736.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util --cov file_utils") 0
32.16
 Travis Job 6736.6
Source Files on build 6736
Detailed source file information is not available for this build.