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broadinstitute / viral-ngs / 6750 / 6
23%
master: 23%

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DEFAULT BRANCH: master
Ran 25 Oct 2018 01:45AM UTC
Files 41
Run time 2s
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25 Oct 2018 01:34AM UTC coverage: 32.127% (-0.03%) from 32.157%
TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util --cov file_utils"

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assembly.py - added --alwaysSucceed option to SPAdes (#888)

assembly.py - added --alwaysSucceed option to SPAdes; made always-succeed the default for demux_plus.wdl workflow (for #886)

418 of 2683 branches covered (15.58%)

2068 of 6437 relevant lines covered (32.13%)

0.32 hits per line

Source Files on job 6750.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util --cov file_utils")
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