bigdatagenomics / adam / 2617

DEFAULT BRANCH: master
Ran
Jobs 8
Files 147
Run time 1min
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jenkins

heuermh 
[ADAM-1480] Add switch to disable the fast concat method.

Resolves #1478.

42 of 42 new or added lines in 12 files covered. (100.0%)

4998 of 6111 relevant lines covered (81.79%)

6.53 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
3
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/ADAM2Vcf.scala
12
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
2
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
4
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
5
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
7
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2617.1 0
81.67
2 2617.2 0
81.67
3 2617.3 0
81.64
4 2617.4 0
81.66
5 2617.5 0
81.64
6 2617.6 0
81.66
7 2617.7 0
81.66
8 2617.8 0
81.66
Source Files on build 2617
Detailed source file information is not available for this build.