2086

Builds	Branch	Commit	Type	Ran	Committer	Via	Coverage
2086	mlin-wip	make RNC UnphasedVariants precede OverlappingVariants in the case of 1/1 or 1/2 calls	push	04 Nov 2019 12:47AM UTC	mlin	travis-ci	pending completion set done
2085	master	make genotyper_config::squeeze override genotyper_config::more_PL	push	01 Nov 2019 05:54PM UTC	mlin	travis-ci	pending completion set done
2084	v1.2.2	Include alt allele trimming and full PLs to DeepVariant defaults.	push	01 Nov 2019 07:17AM UTC	mlin	travis-ci	pending completion set done
2083	master	Include alt allele trimming and full PLs to DeepVariant defaults.	push	01 Nov 2019 07:52AM UTC	mlin	travis-ci	pending completion set done
2082	master	Include alt allele trimming and full PLs to DeepVariant defaults.	Pull #196	31 Oct 2019 05:51PM UTC	web-flow	travis-ci	pending completion set done
2081	v1.2.1	improve handling of DeepVariant non-called records Compared to other callers, DeepVariant generates more non-called (./.) gVCF records to express uncertainty; including both reference bands and variant records. In 497277a5 we made sure to preserv...	push	31 Oct 2019 05:02PM UTC	mlin	travis-ci	pending completion set done
2079	mlin-dv-noncalled	improve handling of DeepVariant non-called records Compared to other callers, DeepVariant generates more non-called (./.) gVCF records to express uncertainty; including both reference bands and variant records. In 497277a5 we made sure to preserv...	Pull #195	31 Oct 2019 07:55AM UTC	web-flow	travis-ci	pending completion set done
2078	mlin-dv-noncalled	improve handling of DeepVariant non-called records Compared to other callers, DeepVariant generates more non-called (./.) gVCF records to express uncertainty; including both reference bands and variant records. In 497277a5 we made sure to preserv...	push	31 Oct 2019 07:22AM UTC	mlin	travis-ci	pending completion set done
2076	master	glnexus_cli: fix short options	push	30 Oct 2019 10:27PM UTC	mlin	travis-ci	pending completion set done
2077	v1.2.0	glnexus_cli: fix short options	push	30 Oct 2019 09:56PM UTC	mlin	travis-ci	pending completion set done
2075	master	add option to trim uncalled alleles (#193) With genotype revision on, it's possible for an allele to be included in the pVCF site but not actually called in any of the final sample GT genotypes. This is rare and mainly associated with low/margina...	push	29 Oct 2019 12:52PM UTC	web-flow	travis-ci	pending completion set done
2074	mlin-trim-uncalled-alleles	fixup	Pull #193	29 Oct 2019 12:57AM UTC	web-flow	travis-ci	pending completion set done
2073	mlin-trim-uncalled-alleles	fixup	push	29 Oct 2019 12:23AM UTC	mlin	travis-ci	pending completion set done
2070	master	DeepVariant preset config (v1) for WGS and WES (#190) Update DeepVariant preset config with parameters optimized for general-purpose cohort merging	push	20 Oct 2019 12:33PM UTC	mlin	travis-ci	pending completion set done
2069	tedyun-deepvariant-config	DeepVariant WGS and WES preset config (v1)	Pull #190	18 Oct 2019 07:38PM UTC	web-flow	travis-ci	pending completion set done

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