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dnanexus-rnd / GLnexus / 2122

Builds Branch Commit Type Ran Committer Via Coverage
2122 mlin-overlap-compactions-discovery glnexus_cli: parallelize unifier by contig push 23 Dec 2019 10:10PM UTC mlin travis-ci pending completion   set done
2121 mlin-overlap-compactions-discovery glnexus_cli: parallelize unifier by contig Pull #204 23 Dec 2019 09:38AM UTC web-flow travis-ci pending completion   set done
2120 mlin-overlap-compactions-discovery glnexus_cli: parallelize unifier by contig push 23 Dec 2019 09:15AM UTC mlin travis-ci pending completion   set done
#1970 master Merge 5c0a7c003 into 0a1793d2e push 23 Dec 2019 09:03AM UTC GitHub travis-ci pending completion   set done
2118 mlin-overlap-compactions-discovery glnexus_cli: parallelize unifier by contig push 23 Dec 2019 08:39AM UTC mlin travis-ci pending completion   set done
2117 mlin-overlap-compactions-discovery glnexus_cli: overlap allele discovery with RocksDB compaction Previously glnexus_cli waited for RocksDB compactions to finish, then reopens the database in READ_ONLY mode for allele discovery. Two issues with this: 1) The compaction process tends... push 23 Dec 2019 06:54AM UTC mlin travis-ci pending completion   set done
2116 mlin-overlap-compactions-discovery glnexus_cli: overlap allele discovery with RocksDB compaction Previously glnexus_cli waited for RocksDB compactions to finish, then reopens the database in READ_ONLY mode for allele discovery. Two issues with this: 1) The compaction process tends... push 23 Dec 2019 01:55AM UTC mlin travis-ci pending completion   set done
2114 master Move a few helper functions into their own file push 13 Dec 2019 07:43PM UTC mlin travis-ci pending completion   set done
2113 move_bcf_utils Move a few helper functions into their own file Pull #203 11 Dec 2019 06:36PM UTC web-flow travis-ci pending completion   set done
2109 v1.2.3 unifier: with preference=small, also require all alleles at a site to mutually overlap push 08 Dec 2019 09:47AM UTC mlin travis-ci pending completion   set done
2108 master unifier: with preference=small, also require all alleles at a site to mutually overlap push 07 Dec 2019 11:04PM UTC mlin travis-ci pending completion   set done
2107 master revise_genotypes: don't apply frequency penalty to 'lost' alleles in monoallelic sites push 05 Dec 2019 09:11PM UTC mlin travis-ci pending completion   set done
2106 mlin-dv-partial-data revise_genotypes: don't apply frequency penalty to 'lost' alleles in monoallelic sites Pull #202 05 Dec 2019 08:08PM UTC web-flow travis-ci pending completion   set done
2105 master set unifer_config max_alleles_per_site for DeepVariant (#201) push 05 Dec 2019 06:01PM UTC mlin travis-ci pending completion   set done
2104 dv_max_alleles_per_site set unifer_config max_alleles_per_site for DeepVariant Pull #201 05 Dec 2019 02:58PM UTC web-flow travis-ci pending completion   set done
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