2425

Builds	Branch	Commit	Type	Ran	Committer	Via	Coverage
2425	hbupgrade	hadoop-bam upgrade follow-ons - move LazyMessage/assert logic out to magic-rdds - upgrade that version, and scalatest - move off a spark Logger	Pull #578	15 Sep 2016 01:27AM UTC	web-flow	travis-ci	pending completion set done
2424	master	Merge pull request #577 from hammerlab/local-writing Move commons-io back to standard dep	push	14 Sep 2016 07:03PM UTC	web-flow	travis-ci	pending completion set done
2422	local-writing	move commons-io back to standard dep	push	14 Sep 2016 06:31PM UTC	arahuja	travis-ci	pending completion set done
2421	master	Merge pull request #576 from ryan-williams/args add somatic-standard end-to-end test	push	14 Sep 2016 03:19PM UTC	web-flow	travis-ci	pending completion set done
2420	master	add somatic-standard end-to-end test	Pull #576	14 Sep 2016 02:22PM UTC	web-flow	travis-ci	pending completion set done
2419	master	add somatic-standard end-to-end test	Pull #576	14 Sep 2016 02:13AM UTC	web-flow	travis-ci	pending completion set done
2418	somatic-standard-upgrades-continue	separate normal and tumor thresholds	push	12 Sep 2016 06:04PM UTC	arahuja	travis-ci	pending completion set done
2416	master	Merge pull request #571 from hammerlab/somatic-standard-upgrades Update likelihood code to handle non-uniform allelic mixtures	push	09 Sep 2016 10:44PM UTC	web-flow	travis-ci	pending completion set done
2415	master	likelihood nits - private-ize a few methods - simplify alignment-inclusion API in likelihood calculation: simple boolean instead of arbitrary function - remove "Likelihood." from call-sites - misc line-spacing	Pull #571	09 Sep 2016 10:23PM UTC	web-flow	travis-ci	pending completion set done
2413	master	Merge pull request #574 from ryan-williams/likelihood likelihood nits	Pull #571	09 Sep 2016 10:21PM UTC	web-flow	travis-ci	pending completion set done
2411	master	fix ordering of tumor and normal read data	Pull #575	09 Sep 2016 10:19PM UTC	web-flow	travis-ci	pending completion set done
2414	somatic-standard-upgrades	likelihood nits - private-ize a few methods - simplify alignment-inclusion API in likelihood calculation: simple boolean instead of arbitrary function - remove "Likelihood." from call-sites - misc line-spacing	push	09 Sep 2016 10:18PM UTC	arahuja	travis-ci	pending completion set done
2410	tn-flip	fix ordering of tumor and normal read data	push	09 Sep 2016 10:12PM UTC	arahuja	travis-ci	pending completion set done
2409	somatic-standard-upgrades-continue	fix ordering	push	09 Sep 2016 09:55PM UTC	arahuja	travis-ci	pending completion set done
2408	somatic-standard-upgrades-continue	ensure non-empty alt-bases	push	09 Sep 2016 08:56PM UTC	arahuja	travis-ci	pending completion set done

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