galantelab / sideRETRO / 200

Builds Branch Commit Type Ran Committer Via Coverage
200 master Version 0.10.0 push thiago-miller travis-ci pending completion   set done
199 tdev FIX: cluster.c (cluster): Clean tables before run Clean clustering tables if a db exists in mc step push thiago-miller travis-ci pending completion   set done
198 tdev FIX: cluster.c (cluster): Clean tables before run Clean clustering tables if a db exists in mc step push thiago-miller travis-ci pending completion   set done
197 tdev ADD: cluster.c, merge_call.c: --blacklist-padding Option to increase the blacklisted regions (left and right) by N bases push thiago-miller travis-ci pending completion   set done
196 tdev ADD: check_sider_blacklist.c push thiago-miller travis-ci pending completion   set done
195 blacklist ADD: check_sider_blacklist.c push thiago-miller travis-ci pending completion   set done
194 blacklist ADD: check_sider_blacklist.c push thiago-miller travis-ci pending completion   set done
193 blacklist ADD: check_sider_blacklist.c push thiago-miller travis-ci pending completion   set done
192 blacklist ADD: exon.c (exon_tree_index_dump): GffFilter push Thiago L. A. Miller travis-ci pending completion   set done
191 blacklist FIX: cluster.c (prepare_query_stmt): rlen == 0 push Thiago L. A. Miller travis-ci pending completion   set done
190 blacklist ADD: blacklist.c, merge_call.c: GffFilter push thiago-miller travis-ci pending completion   set done
189 blacklist FIX: abnormal.c (dump_alignment): rlen == 0 push thiago-miller travis-ci pending completion   set done
188 blacklist ADD: gff.c (gff_looks_like_gff_file): GFF filename Test if the filename seems to belong to a GFF/GFF3/GTF file push thiago-miller travis-ci pending completion   set done
187 blacklist ADD: cluster.c, db.c, blacklist.c: Filter column Add cluster filter: CHR, DIST, REGION, SUPPORT, NONE. The philosophy now is to keep all clusters and subclusters and add a new column to handle the filtering steps push thiago-miller travis-ci pending completion   set done
186 blacklist ADD: gff.c (gff_filter_*) Add gff filtering capabilities. The user must initiate a type GffFilter with the feature_type to be filtered (e.g. gene, transcript, exon) and may add attributes aswell (e.g. gene_type=protein_coding). The attributes are... push thiago-miller travis-ci pending completion   set done