Clinical-Genomics / microSALT / #259

Builds Branch Commit Type Ran Committer Via Coverage
#259 183-remove-kmer-tackning-col Fix #183: Remove potentially confusing Kmer täckning column Pull #184 samuell travis-ci
76.11
#258 183-remove-kmer-tackning-col Fix missing vim genes (#182) * Replace Spades assembler with SKESA * Replace blaVIM test data with output from SKESA * Convert sequence naming in Skesa contigs fasta file into Spades format * Check if reference_length is set before showing it ... Pull #178 web-flow travis-ci
76.11
#257 rc400 Fix missing vim genes (#182) * Replace Spades assembler with SKESA * Replace blaVIM test data with output from SKESA * Convert sequence naming in Skesa contigs fasta file into Spades format * Check if reference_length is set before showing it ... Pull #178 web-flow travis-ci
76.11
#256 180-fix-missing-vim-genes Remove internal file paths Pull #182 samuell travis-ci
76.11
#255 180-fix-missing-vim-genes Check if reference_length is set before showing This is so that the report rendering is not completely stopped if reference_length is not set Pull #182 samuell travis-ci
76.11
#254 180-fix-missing-vim-genes Replace Spades assembler with SKESA push samuell travis-ci
76.3
#253 180-fix-missing-vim-genes Fix code that would delete blast matches with identical coverage push samuell travis-ci
76.12
#252 180-fix-missing-vim-genes Simplify check for genes in test push samuell travis-ci
76.12
#251 180-fix-missing-vim-genes 149 fix missing resistances (#179) * Add more blast hits in resistance test data * Return hits in scraping method and fail test by requiring blaOXA-48 * Fix #149 by making regex specific and not matching multiple genes Pull #178 web-flow travis-ci
75.82
#250 rc400 149 fix missing resistances (#179) * Add more blast hits in resistance test data * Return hits in scraping method and fail test by requiring blaOXA-48 * Fix #149 by making regex specific and not matching multiple genes Pull #178 web-flow travis-ci
75.82
#249 149-fix-missing-resistances Fix #149 by making regex specific and not matching multiple genes Pull #179 samuell travis-ci
75.82
#248 149-fix-missing-resistances Simplify check for genes in test Pull #179 samuell travis-ci
76.12
#247 149-fix-missing-resistances Keep only 100% identity matches Pull #179 samuell travis-ci
76.16
#246 149-fix-missing-resistances Simplify check for genes in test Pull #179 samuell travis-ci
76.12
#245 149-fix-missing-resistances Fix missing VIM gene by not deleting genes with the same coverage Pull #179 samuell travis-ci
76.12