biologyguy / RD-MCL / 273

Builds Branch Commit Type Ran Committer Via Coverage
273 master New tutorial images push biologyguy travis-ci pending completion   set done
272 master New tutorial images push biologyguy travis-ci pending completion   set done
271 master New tutorial images push biologyguy travis-ci pending completion   set done
270 master Catch negative values in Worker.idle_workers() push biologyguy travis-ci pending completion   set done
267 master Wait longer before querying DBs when lots of threads are active push biologyguy travis-ci pending completion   set done
265 master Sort input seqs by size and use --pileup It is assumed that there is a conserved domain shared among all recs, even in the smallest record. By iteratively adding sequences to the alignment, starting with the smallest, there is the best chance o... push biologyguy travis-ci pending completion   set done
264 master Implement file writing in group_by_cluster push biologyguy travis-ci pending completion   set done
263 master Remove split_gb_by_taxa.py because it's in SeqBuddy now push biologyguy travis-ci pending completion   set done
262 master Minor fixes Just a couple text output checks that were broken, and a regex thing, nothing big push biologyguy travis-ci pending completion   set done
261 master Catch cases where subjobs have been duplicated This is almost certainly a race issue that is causing me to lose workers unnecessarily. If a primary cluster fails then still terminate because something serious has probably happened that can't b... push biologyguy travis-ci pending completion   set done
260 master Catch cases where subjobs have been duplicated This is almost certainly a race issue that is causing me to lose workers unnecessarily. If a primary cluster fails then still terminate because something serious has probably happened that can't b... push biologyguy travis-ci pending completion   set done
259 master Catch missing ss2 files from subjobs and loop instead of terminating This is almost certainly a race issue that is causing me to lose workers unnecessarily. If ss2 files are missing from a primary cluster, then still terminate because something... push biologyguy travis-ci pending completion   set done
258 master Catch missing ss2 files from subjobs and loop instead of terminating This is almost certainly a race issue that is causing me to lose workers unnecessarily. If ss2 files are missing from a primary cluster, then still terminate because something... push biologyguy travis-ci pending completion   set done
257 master Prevent worker crash when 'processing' unique constraint fails Simply delete the job from the queue and then grab a new one push biologyguy travis-ci pending completion   set done
256 master Change diminishing returns base to a dynamic value instead of fixed It's now related to the number of taxa and average number of paralogs, and it is reset for each unique cluster. This change removes a user set parameter and will hopefully be m... push biologyguy travis-ci pending completion   set done