biologyguy / RD-MCL / 236

Builds Branch Commit Type Ran Committer Via Coverage
236 master Monkeypatch helpers.Timer unit test Prevents race in the test push biologyguy travis-ci pending completion   set done
233 master Use rdmcl.mc_score_sequences in worker Needed to modify the function a bit to make it compatible to both rdmcl and the worker push biologyguy travis-ci pending completion   set done
229 master Unit tests for HeartBeat() push biologyguy travis-ci pending completion   set done
228 master Final unit test to hit 100% coverage on Worker.start() push biologyguy travis-ci pending completion   set done
227 master Output any additional alignment params and TrimAl range push biologyguy travis-ci pending completion   set done
226 master Big batch of Worker.start() unit tests And a few little refactors push biologyguy travis-ci pending completion   set done
225 master Next batch of launch_worker unit tests push biologyguy travis-ci pending completion   set done
224 master Rename out_dir variable to subjob_out_dir More clear, and spawn_subjobs unit tests written push biologyguy travis-ci pending completion   set done
223 master Create output dir with Worker instantiation It was happening as part of the UI instead of the Worker class. Bad. New unit tests added as well push biologyguy travis-ci pending completion   set done
222 master Refactor Worker.trimal() for easier testing Also including tests push biologyguy travis-ci pending completion   set done
221 master Refactor Worker.prepare_psipred_dfs() There were extra arguments being passed in and an unnecessary breakout Unit tests added push biologyguy travis-ci pending completion   set done
220 master Fix bug in Worker.clean_dead_threads() Also full unit test coverage of the method push biologyguy travis-ci pending completion   set done
219 master Keep DynamicPrint object inside Worker class, not global This was bad design in general, and was causing issues in py.test, so spin the _write() patch method off as a standard function and handle the -log and --quiet flags a little more sanely.... push biologyguy travis-ci pending completion   set done
218 master New test for launch_worker.score_sequences push biologyguy travis-ci pending completion   set done
217 master Clean up a couple bugs pertaining to subdividing large jobs A few things were being named incorrectly, and the jobs were being broken up into smaller chunks than I intended. Fixed. push biologyguy travis-ci pending completion   set done