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NBISweden / AGAT / 2058946293 / 1
82%
master: 57%

Build:
Build:
LAST BUILD BRANCH: v1.6.1
DEFAULT BRANCH: master
Ran 29 Mar 2022 02:14PM UTC
Files 62
Run time 18s
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29 Mar 2022 02:14PM UTC coverage: 81.564% (-0.04%) from 81.605%
2058946293.1

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github

Jacques Dainat
Fix #215. Merge feature is overlap/adjacent if non spreadfeature and merge spreadfeature only if adjacent (like that avoid problem with ribosomal slippage). It is done by using an extra check step called _check_all_level3_locations. Remove _manage_location function replaced by more specific functions named merge_features and _merge_adjacent_and_overlaping_locations + simplify _check_exons and_check_utrs accordingly. Change name check_all_levelx_positions to  check_all_levelx_locations.

10233 of 12546 relevant lines covered (81.56%)

1421.49 hits per line

Source Files on job 2058946293.1
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