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MatthewRalston / kmerdb / 33 / 1
5%
master: 5%

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DEFAULT BRANCH: master
Ran 05 Jan 2021 10:26PM UTC
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05 Jan 2021 09:35PM UTC coverage: 33.333%. Remained the same
33.1

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MatthewRalston
Adds a new feature to the way reports are kept as data within the setup.py package distribution settings. Adds example dataset and replaces the report directory with a new directory. Initializing a new report for k-mer distribution analysis and PCA + k-means analysis. Formally adds the initial Cac_subsample_correlations.txt data file into the repository's history. Some changes to bin/kdb. Minor bugfixes in addition. For example, --output-delimiter added for get_matrix(), minor changes to help string, adds proper sys.stdin parsing for 'kdb matrix' via get_matrix(). Also separates ecopy normalization from NEW! DESeq2 normalization (which outputs ints by default).

202 of 606 relevant lines covered (33.33%)

0.33 hits per line

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