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angelolab / ark-analysis / 2906 / 1
94%
master: 94%

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DEFAULT BRANCH: master
Ran 01 Dec 2020 03:51PM UTC
Files 19
Run time 2s
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01 Dec 2020 03:46PM UTC coverage: 98.772% (+0.009%) from 98.763%
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Extraction options (#355)

* adds option for selecting extraction function

* updates tests for signal extraction

* adds markerquant test

* documentation fix

* adds newline for correct docstring formating

* adds example to notebook

* adds higher level testing for extraction function calls

* removes example calls to positive pixel extraction in segmentation notebook

* removes test expecting error

* updates default extraction name and refactors kwarg access

* uses less hacky io sanitation for marker quant regionprops

1046 of 1059 relevant lines covered (98.77%)

0.99 hits per line

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