qMRLab / qMRLab / 2413 / 2
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coverage: 41.784% (-0.5%) from 42.32%
2413.2

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MP2RAGE (#375)

* Add Jose Marques original code, and create blank model template

* Barebones fit data implementation using demo script

* Fix typo

* Update how data is handled from input

* Refactor how options are handled, but still use hardcoded values

* Create GUI options, but don't replace the hardcoded values in the code yet

* Assert that the default input options are equal to the hardcoded demo values

*  Replace hardcoded values by passed options values

* Add tooltips [not currently working]

* Fix tooltips

* Master edit

* Add B1+ filtering option
* Move protocols to protocols panel 
* Improve tabletip to provide tip per table 
* Add tip per table for mp2rage 
* Modify noddi for compliance to new tabletip 
* Edit T1correctpackgeTFL to remove plots

* Master edit

* Add B1+ filtering option
* Move protocols to protocols panel 
* Improve tabletip to provide tip per table 
* Add tip per table for mp2rage 
* Modify noddi for compliance to new tabletip 
* Edit T1correctpackgeTFL to remove plots
* Add INV1 INV2 optional fields 
* Make mask field take effect 
* Fix header comments

* Misc edits

* Change Protocol structure, split namespaces 
* Add option to get rid of buttons 
* Get rid of INV1 INV2 for now

* Change KSPace --> NumberOfShots

* Change table namespace 
* Add row labels 
* Add exception handling for devs

* Update tip

* B1 range control and fix invEff problem

* Towards BIDS

* Add env detail scaper for derivatives 
* Add more BIDS entities 
* Add attachScrollPanelTo (may be useful) 
* Add TODOs

* Add panel scaling functionality

* Edit ScalePanel.json to scale 
* json2struct to read JSON or JSON array
* Note: BIDS.util.jsondecode crashes for struct array

* Complete model & some BIDS 

* Fix explanations 
* Fix OSF file version 
* Fix input names 
* Add BIDS option 
* Improve algorithm to deal with different input alternatives 
* Adjust phase range ... (continued)

3438 of 8228 relevant lines covered (41.78%)

883.15 hits per line

Source Files on job 2413.2