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master: 86%

Ran 30 Aug 2019 11:12PM CUT

Files 38

Run time 3s

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Committed 30 Aug 2019 11:03PM CUT coverage: 70.309% (-0.1%) from 70.422%

Job # TF_VERSION=1.8.0

Build Type

push

travis-ci-com

Committed by

web-flow

Commit Message

Improved cell tracking functionality and performance (#212)

* algorithm tuning and false-positive postprocessing

* updates to graph tracking postprocessing

* Added temporal exclusion for false-positive detection

* update siamese generator tests with channels_first and their own dummy data

* Added basic tests for tracking.py and some easy PEP8 fixes (#206)

* minor refactor of sub_area for readability / comment out old code

* slightly improved _get_cost_matrix

Run Details

4073 of 5793 relevant lines covered (70.31%)

0.7 hits per line

Source Files on job 1214.1 (TF_VERSION=1.8.0)

Coverage	File	Lines	Relevant	Covered	Missed	Hits/Line
10.55	deepcell/training.py	841 + 800	237 + 214	25 + 4	212 + 210	1.0
21.88	deepcell/utils/plot_utils.py	353 + 341	128 + 119	28 + 19	100 + 100	1.0
24.42	deepcell/model_zoo/maskrcnn.py	365 + 24	86 - 109	21 - 149	65 + 40	1.0
33.33	deepcell/utils/export_utils.py	100 + 70	33 + 18	11 + 4	22 + 14	1.0
35.0	deepcell/utils/backbone_utils.py	390 + 386	200 + 198	70 + 68	130 + 130	1.0
42.62	deepcell/utils/tracking_utils.py	242 + 146	122 + 63	52 + 1	70 + 62	1.0
42.78	deepcell/losses.py	441 + 415	180 + 166	77 + 67	103 + 99	1.0
45.0	deepcell/callbacks.py	164 + 125	60 + 38	27 + 11	33 + 27	1.0
52.82	deepcell/utils/retinanet_anchor_utils.py	975 + 908	373 + 314	197 + 146	176 + 168	1.0
61.24	deepcell/layers/retinanet.py	368 + 351	178 + 164	109 + 96	69 + 68	1.0

70.31
deepcell/

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master: 86%

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Source Files on job 1214.1 (TF_VERSION=1.8.0)

vanvalenlab / deepcell-tf / 1214 / 1 86% master: 86%

README BADGES x

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RDoc

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Source Files on job 1214.1 (TF_VERSION=1.8.0)

vanvalenlab / deepcell-tf / 1214 / 1
86%
master: 86%

README BADGES
x