1
89%
master: 89%

Ran 10 Jun 2019 05:05PM UTC

Files 109

Run time 6s

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Committed 10 Jun 2019 05:00PM UTC coverage: 88.973% (-0.1%) from 89.111%

Job # 1733.1

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

Add support for bgzf. (#484)

Add support for reading of bgzf.
- If the index file is not present, use fusion break to speed up the pipeline.
- Otherwise, parse the index file and read the bgzf in parallel.
- The BGZF can end with .gz or .bgz, and must be in GCS.
- The index file is required to be in the same path as bgzf ending with .tbi.
- Only PyVCF Parser is supported.

Run Details

7415 of 8334 relevant lines covered (88.97%)

0.89 hits per line

googlegenomics / gcp-variant-transforms / 1733 / 1
89%
master: 89%

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Source Files on job 1733.1

googlegenomics / gcp-variant-transforms / 1733 / 1 89% master: 89%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Source Files on job 1733.1

googlegenomics / gcp-variant-transforms / 1733 / 1
89%
master: 89%

README BADGES
x