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neuropoly / spinalcordtoolbox / 10616 / 2
67%
master: 59%

Build:
DEFAULT BRANCH: master
Ran 06 Mar 2019 01:34PM UTC
Files 86
Run time 51min
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06 Mar 2019 01:09PM UTC coverage: 67.452% (+0.02%) from 67.428%
SCT_MINICONDA=2 MPLBACKEND=Agg

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Added possibility to rescale intervertebral disc distance and various improvements (#2182)

* sct_label_vertebrae: Added flag -scale-dist to adjust disc distance

Fixes #2181

* sct_label_vertebrae: Direct call to isct_antsApplyTransforms

For faster execution

* reports/slice: Now using get_centerline to center in mid-sagittal

Faster, cleaner, and more accurate

* sct_label_vertebrae: Removed system calls

* reports/slice: Fixed regression for sct_detect_pmj case

* reports/qc: Fixed visuals in QC report for detect_pmj

* vertebrae/core: Moved most internal functions outside of script

...and created vertebrae/core.py

* process_seg: Removed label_vert()

Will be hosted in vertebrae/core

* sct_process_segmentation: Removed label-vert process

Moved to sct_label_vertebrae

* vertebrae/core: Added disc-label file labeling functionality

Previously in process_seg

* sct_label_vertebrae: Added disc-label file labeling functionality

* testing/test_sct_label_vertebrae: Moved label_disc there

9873 of 14637 relevant lines covered (67.45%)

0.67 hits per line

Source Files on job 10616.2 (SCT_MINICONDA=2 MPLBACKEND=Agg)
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Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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