10616
67%

Ran 06 Mar 2019 01:28PM UTC

Jobs 2

Files 86

Run time 270min

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Build # 10616

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

Added possibility to rescale intervertebral disc distance and various improvements (#2182)

* sct_label_vertebrae: Added flag -scale-dist to adjust disc distance

Fixes #2181

* sct_label_vertebrae: Direct call to isct_antsApplyTransforms

For faster execution

* reports/slice: Now using get_centerline to center in mid-sagittal

Faster, cleaner, and more accurate

* sct_label_vertebrae: Removed system calls

* reports/slice: Fixed regression for sct_detect_pmj case

* reports/qc: Fixed visuals in QC report for detect_pmj

* vertebrae/core: Moved most internal functions outside of script

...and created vertebrae/core.py

* process_seg: Removed label_vert()

Will be hosted in vertebrae/core

* sct_process_segmentation: Removed label-vert process

Moved to sct_label_vertebrae

* vertebrae/core: Added disc-label file labeling functionality

Previously in process_seg

* sct_label_vertebrae: Added disc-label file labeling functionality

* testing/test_sct_label_vertebrae: Moved label_disc there

Run Details

9874 of 14637 relevant lines covered (67.46%)

1.35 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	10616.1 (SCT_MINICONDA=2 MPLBACKEND=Agg)	06 Mar 2019 01:28PM UTC	0	67.45	Travis Job 10616.1
2	10616.2 (SCT_MINICONDA=2 MPLBACKEND=Agg)	06 Mar 2019 01:34PM UTC	0	67.45	Travis Job 10616.2

Source Files on build 10616

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