1
79%
master: 79%

Ran 18 Oct 2018 04:04AM UTC

Files 98

Run time 6s

Badge

Embed ▾

Committed 18 Oct 2018 03:55AM UTC coverage: 78.712% (+0.04%) from 78.675%

Job # PYVER=2.7

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

Fix Simulator initials_dict when set by array (#377)

The `Simulator` class method `initials_dict` returns initial conditions
as a dictionary, mostly for use by network-free simulators like NFsim.
When initial conditions are set by an array or by a list, species which
were not explicitly set using `Initial()` in the model are ignored.

This would only affect users of the `BngSimulator`, which uses this
method, or anyone who called this method directly after setting
initials with an array or list.

This PR fixes the issue by returning a dictionary with values from the
array. This requires a species list for the model, so a `ValueError`
is raised where this is not available/`generate_equations` hasn't been
called yet.

Run Details

7184 of 9127 relevant lines covered (78.71%)

0.79 hits per line

LoLab-VU / pysb / 820 / 1
79%
master: 79%

README BADGES
x

Markdown

Textile

RDoc

HTML

Rst

Source Files on job 820.1 (PYVER=2.7)

LoLab-VU / pysb / 820 / 1 79% master: 79%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Source Files on job 820.1 (PYVER=2.7)

LoLab-VU / pysb / 820 / 1
79%
master: 79%

README BADGES
x