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master: 89%

Ran 16 Oct 2018 07:38PM UTC

Files 95

Run time 204min

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Committed 16 Oct 2018 07:32PM UTC coverage: 87.841% (+0.008%) from 87.833%

Job # 1374.1

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

add option to preserve sample oder (#378)

In BQ to VCF, if the BigQuery table is formed by merging a large number of VCF files, the pipeline may fail/too slow when combining the call names. Therefore, add an option` --preserve_call_names_order`. By setting this flag to false, it can speed up this special case and reduce the memory requirements.

Issues: 85
Tested: integration tests.

Run Details

6249 of 7114 relevant lines covered (87.84%)

0.88 hits per line

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master: 89%

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master: 89%

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