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Ran 11 Oct 2018 07:39PM UTC

Files 95

Run time 6s

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Committed 11 Oct 2018 07:34PM UTC coverage: 87.809%. Remained the same

Job # 1358.1

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

update the default value for number of bases per shard (#375)

Change the default value of number_of_bases_per_shard from 10,000 to 1,000,000.

For large datasets (tested with `bigquery-public-data:human_genome_variants.platinum_genomes_deepvariant_variants_20180823`), the run time for BigQuery to VCF shards are almost the same (45min), while the time for composing the shards are significantly dropped (from 1.8h to 1 min).
Issues: 85
Tested: manually ran BQ to VCF.

Run Details

6223 of 7087 relevant lines covered (87.81%)

0.88 hits per line

googlegenomics / gcp-variant-transforms / 1358 / 1
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master: 89%

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googlegenomics / gcp-variant-transforms / 1358 / 1 89% master: 89%

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Markdown

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RDoc

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googlegenomics / gcp-variant-transforms / 1358 / 1
89%
master: 89%

README BADGES
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