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Ran 14 Aug 2018 09:34PM UTC

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Committed 14 Aug 2018 09:29PM UTC coverage: 89.88% (+0.009%) from 89.871%

Job # 1131.1

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push

travis-ci

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web-flow

Commit Message

VcfParser abstract class (#322)

* VcfParser abstract class

This PR implements a generic VcfParser class and a derived class based
on Pyvcf.
This is a preparation for a second PR in which we add the support for
Nucleus based parser.

* VcfParser abstract class

This PR implements a generic VcfParser class and a derived class based
on Pyvcf.
This is a preparation for a second PR in which we add the support for
Nucleus based parser.

* Review comments

Based on comments here we added a new unit test and also changed on of
the existing ones. Also modified one the input VCF files to include an
empty line so that we make sure we have a test with an empty line.

* Second round of comments

* Last round of comments

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