6
23%
master: 23%

Ran 23 Jul 2018 03:04PM UTC

Files 41

Run time 6s

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Committed 23 Jul 2018 02:51PM UTC coverage: 32.71%. Remained the same

Job # TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]

Build Type

push

travis-ci

Committed by

tomkinsc

Commit Message

dxWDL 0.72: revert WDLs to unbound task inputs (#857)

* update dxWDL to 0.71 and cromwell to 33.1

* remove boilerplate workflow inputs that simply echo task inputs and improve user UI/API in dnanexus

* update to 0.72 and add verbose flag

* also revert dx test input jsons to original stage spec (except for scattered demux-plus)

* fix cromwell-local input json for unit tests, also clean up first stage of assemble_denovo_with_deplete* workflows

Run Details

2047 of 6258 relevant lines covered (32.71%)

0.33 hits per line

Source Files on job 6350.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure])

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