2
67%
master: 59%

Ran 07 Jul 2018 05:49PM UTC

Files 73

Run time 5s

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Committed 07 Jul 2018 05:38PM UTC coverage: 58.261% (+0.04%) from 58.217%

Job # SCT_MINICONDA=2 MPLBACKEND=Agg

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

sct_propseg: Now possible to rescale data header to be able to segment non-human spinal cord (mice, rats, etc.) (#1903)

* reorganized usage

* minor usage update

* started to implement header-based rescaling (WIP)

* now creating file in temp folder, and fixed input to propseg function

* added flag to enable/disable the algorithm that corrects the segmentation

* added doc

* refactored to follow variable conventions

* finished implementing the major part of the rescaling

* fixed issue with output file name

* moved import at the beginning

* added flag -rescale

* fixing output path issues (unfinished)

* fixed output filename

* fixed typo in usage

* does not rename the centerline if rescaled is on

* removed TODO

* added TODO to deal with removal of temp file (not urgent)

Run Details

9905 of 17001 relevant lines covered (58.26%)

0.58 hits per line

neuropoly / spinalcordtoolbox / 9081 / 2
67%
master: 59%

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Source Files on job 9081.2 (SCT_MINICONDA=2 MPLBACKEND=Agg)

neuropoly / spinalcordtoolbox / 9081 / 2 67% master: 59%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Source Files on job 9081.2 (SCT_MINICONDA=2 MPLBACKEND=Agg)

neuropoly / spinalcordtoolbox / 9081 / 2
67%
master: 59%

README BADGES
x