5
23%
master: 23%

Ran 04 Jul 2018 09:53PM UTC

Files 47

Run time 6s

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Committed 04 Jul 2018 09:31PM UTC coverage: 71.505% (-0.005%) from 71.51%

Job # TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

wdl demux changes to support novaseq (#834)

* reduce memory limit given to IlluminaBasecallsToSam; gc before calling

* chmod +x new mem_in_mb shell scripts

* raise memory to 90% of max

* reduce demux core count 64 -> 32

Run Details

6507 of 9100 relevant lines covered (71.51%)

0.72 hits per line

Source Files on job 6100.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure])

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