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Ran 22 Jun 2018 11:07PM UTC

Files 11

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Committed 22 Jun 2018 10:57PM UTC coverage: 79.452% (+0.2%) from 79.282%

Job # 91.3

Build Type

push

travis-ci

Committed by

jeremymcrae

Commit Message

avoid error with pandas >=0.22.0 when all rates are missing

This fixes a bug where genes can gen p=0.0 when no rates data is available for a gene.
Since pandas 0.22.0, whenever summing a list where all values are NA, pandas will by
by default give sum=0.0, which if all gene rates are missing, ends up giving an
expected number of mutation=0, and this results in a P=0. This change reverts to the
previous pandas behaviour, where summing a list of NAs results in NA.

Run Details

290 of 365 relevant lines covered (79.45%)

0.79 hits per line

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master: 80%

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Source Files on job 91.3

jeremymcrae / mupit / 91 / 3 80% master: 80%

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Markdown

Textile

RDoc

HTML

Rst

Source Files on job 91.3

jeremymcrae / mupit / 91 / 3
80%
master: 80%

README BADGES
x