91
80%

Ran 22 Jun 2018 11:07PM UTC

Jobs 2

Files 11

Run time 5s

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Build # 91

Build Type

push

travis-ci

Committed by

jeremymcrae

Commit Message

avoid error with pandas >=0.22.0 when all rates are missing

This fixes a bug where genes can gen p=0.0 when no rates data is available for a gene.
Since pandas 0.22.0, whenever summing a list where all values are NA, pandas will by
by default give sum=0.0, which if all gene rates are missing, ends up giving an
expected number of mutation=0, and this results in a P=0. This change reverts to the
previous pandas behaviour, where summing a list of NAs results in NA.

Run Details

290 of 365 relevant lines covered (79.45%)

1.59 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	91.1	22 Jun 2018 11:07PM UTC	0	80.0	Travis Job 91.1
3	91.3	22 Jun 2018 11:07PM UTC	0	79.45	Travis Job 91.3

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