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jeremymcrae / mupit / 91
80%

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DEFAULT BRANCH: master
Ran 22 Jun 2018 11:07PM UTC
Jobs 2
Files 11
Run time 5s
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avoid error with pandas >=0.22.0 when all rates are missing

This fixes a bug where genes can gen p=0.0 when no rates data is available for a gene.
Since pandas 0.22.0, whenever summing a list where all values are NA, pandas will by
by default give sum=0.0, which if all gene rates are missing, ends up giving an
expected number of mutation=0, and this results in a P=0. This change reverts to the
previous pandas behaviour, where summing a list of NAs results in NA.

290 of 365 relevant lines covered (79.45%)

1.59 hits per line

Jobs
ID Job ID Ran Files Coverage
1 91.1 22 Jun 2018 11:07PM UTC 0
80.0
Travis Job 91.1
3 91.3 22 Jun 2018 11:07PM UTC 0
79.45
Travis Job 91.3
Source Files on build 91
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