2
23%
master: 23%

Ran 01 Nov 2017 02:10PM UTC

Files 44

Run time 3s

Badge

Embed ▾

Committed 01 Nov 2017 01:47PM UTC coverage: 67.231%. Remained the same

Job # PERFORM_TESTING=true

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

docker build optimization (#708)

This changes how the docker image is built. Changes include:

- Change from installing the viral-ngs conda package (easy-deploy-viral-ngs.sh setup) to something closer to setup-git (that uses the current working copy instead of cloning fresh from github).
- Divorce the conda build & deploy steps from the docker build & deploy -- put each in their own separate space in the Travis build matrix and cut end-to-end build time in half.
- Separate out basic infrastructural setup in the Dockerfile to a separate repository such that this Dockerfile only installs the components specific to viral-ngs and its dependencies. This also reduces build time by caching all of the apt-get steps.
- Move Dockerfile to root of git repo. This allows for a direct build of either the github URI or the working copy (e.g. docker build . or docker build https://github.com/broadinstitute/viral-ngs.git).

Run Details

5484 of 8157 relevant lines covered (67.23%)

0.67 hits per line

broadinstitute / viral-ngs / 4831 / 2
23%
master: 23%

README BADGES
x

Markdown

Textile

RDoc

HTML

Rst

Source Files on job 4831.2 (PERFORM_TESTING=true)

broadinstitute / viral-ngs / 4831 / 2 23% master: 23%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Source Files on job 4831.2 (PERFORM_TESTING=true)

broadinstitute / viral-ngs / 4831 / 2
23%
master: 23%

README BADGES
x