Ran
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Files
36
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Run time
2s
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README BADGES
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jenkins
<a href="https://github.com/bigdatagenomics/avocado/commit/<a class=hub.com/bigdatagenomics/avocado/commit/ebabd3818cda25f83d7837d27dfe2c7e1bfb972b">ebabd3818<a href="https://github.com/bigdatagenomics/avocado/commit/ebabd3818cda25f83d7837d27dfe2c7e1bfb972b">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/avocado/commit/<a class="double-link" href="https://github.com/bigdatagenomics/avocado/commit/d46b4cafdb64e3920b187fb14a4f8b5b30b92e87">d46b4cafd</a>">d46b4cafd</a><a href="https://github.com/bigdatagenomics/avocado/commit/ebabd3818cda25f83d7837d27dfe2c7e1bfb972b"> into ca662767f">ca662767f</a>
1013 of 1273 relevant lines covered (79.58%)
0.8 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | ...ala/org/bdgenomics/avocado/cli/TrioGenotyper.scala | 277 + 276 | 47 + 47 | 0 | 47 + 47 | 0.0 | |
0.0 | ...rg/bdgenomics/avocado/cli/BiallelicGenotyper.scala | 245 + 164 | 36 + 6 | 0 - 20 | 36 + 26 | 0.0 - 1.0 | |
0.0 | ...scala/org/bdgenomics/avocado/cli/AvocadoMain.scala | 79 + 38 | 23 + 4 | 0 - 12 | 23 + 16 | 0.0 - 1.0 | |
0.0 | .../org/bdgenomics/avocado/cli/DiscoverVariants.scala | 65 + 64 | 6 + 6 | 0 | 6 + 6 | 0.0 | |
0.0 | ...rg/bdgenomics/avocado/cli/BiallelicGenotyper.scala | 245 + 164 | 25 - 5 | 0 - 20 | 25 + 15 | 0.0 - 1.0 | |
0.0 | ...ala/org/bdgenomics/avocado/cli/TrioGenotyper.scala | 277 + 276 | 35 + 35 | 0 | 35 + 35 | 0.0 | |
0.0 | .../org/bdgenomics/avocado/cli/DiscoverVariants.scala | 65 + 64 | 2 + 2 | 0 | 2 + 2 | 0.0 | |
0.0 | ...a/org/bdgenomics/avocado/util/TreeRegionJoin.scala | 205 | 12 + 2 | 0 - 10 | 12 + 12 | 0.0 - 1.0 | |
0.0 | ...avocado/serialization/AvocadoKryoRegistrator.scala | 40 | 5 | 0 | 5 | 0.0 | |
66.67 | .../scala/org/bdgenomics/avocado/cli/Reassemble.scala | 88 + 72 | 9 | 6 - 3 | 3 + 3 | 1.0 |