bigdatagenomics / avocado / 188
80%
master: 91%

LAST BUILD BRANCH: adam-0.25.0
DEFAULT BRANCH: master
Ran
Jobs 4
Files 25
Run time 9s
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188

Pull #239

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/avocado/commit/<a class=hub.com/bigdatagenomics/avocado/commit/ebabd3818cda25f83d7837d27dfe2c7e1bfb972b">ebabd3818<a href="https://github.com/bigdatagenomics/avocado/commit/ebabd3818cda25f83d7837d27dfe2c7e1bfb972b">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/avocado/commit/<a class="double-link" href="https://github.com/bigdatagenomics/avocado/commit/d46b4cafdb64e3920b187fb14a4f8b5b30b92e87">d46b4cafd</a>">d46b4cafd</a><a href="https://github.com/bigdatagenomics/avocado/commit/ebabd3818cda25f83d7837d27dfe2c7e1bfb972b"> into ca662767f">ca662767f</a>
Pull Request #239: Move genotyping unit over to Spark SQL

171 of 171 new or added lines in 6 files covered. (100.0%)

1013 of 1273 relevant lines covered (79.58%)

3.18 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
89.58
 2.08% avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/DiscoverVariants.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
88.14
 -1.69% avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/TrioCaller.scala
1
75.76
 -3.03% avocado-core/src/main/scala/org/bdgenomics/avocado/realigner/Realigner.scala
3
93.82
 3.14% avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/BiallelicGenotyper.scala
9
67.8
 -15.25% avocado-core/src/main/scala/org/bdgenomics/avocado/models/Observation.scala
Jobs
ID Job ID Ran Files Coverage
1 188.1 36
79.58
2 188.2 36
79.58
3 188.3 36
79.58
4 188.4 36
79.58
Source Files on build 188
Coverage ∆ File Lines Relevant Covered Missed Hits/Line