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Ran 04 Mar 2017 01:34AM UTC

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Committed 03 Mar 2017 09:38PM UTC coverage: 74.604% (-0.04%) from 74.642%

Job # TOX_ENV=py27

Build Type

push

travis-ci

Committed by

jmchilton

Commit Message

First crack at containers documentation and related usability improvements.

- Implement ``planemo lint --biocontainer`` to mirror ``planemo lint --conda_requirements``. Just checks that a tool is ready to go with best practice namespaces for BioContainers tools.
- Implement test case for new linting flag.
- Add new section of documentation to advanced tool topics for containers. Work through examples of both an existing working container (seqtk) and one that must be built on the fly. Demonstrate ``planemo mull``.
- Hack around a bug in Conda 4.2 that makes it so ``planemo mull`` doesn't work out of the box on Mac OS X.
- Add more options and more documentation to the ``planemo mull`` command.

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master: 71%

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