1489
71%

Ran 04 Mar 2017 01:07AM UTC

Jobs 5

Files 134

Run time 26min

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Build # 1489

Build Type

push

travis-ci

Committed by

jmchilton

Commit Message

First crack at containers documentation and related usability improvements.

- Implement ``planemo lint --biocontainer`` to mirror ``planemo lint --conda_requirements``. Just checks that a tool is ready to go with best practice namespaces for BioContainers tools.
- Implement test case for new linting flag.
- Add new section of documentation to advanced tool topics for containers. Work through examples of both an existing working container (seqtk) and one that must be built on the fly. Demonstrate ``planemo mull``.
- Hack around a bug in Conda 4.2 that makes it so ``planemo mull`` doesn't work out of the box on Mac OS X.
- Add more options and more documentation to the ``planemo mull`` command.

Run Details

5884 of 7887 relevant lines covered (74.6%)

0.75 hits per line

Jobs

ID	Job ID	Ran	Coverage
1	1489.1 (TOX_ENV=py27-lint)	04 Mar 2017 01:07AM UTC		Travis Job 1489.1
2	1489.2 (TOX_ENV=py34-lint)	04 Mar 2017 01:08AM UTC		Travis Job 1489.2
3	1489.3 (TOX_ENV=py27-lint-readme)	04 Mar 2017 01:12AM UTC		Travis Job 1489.3
4	1489.4 (TOX_ENV=py27-lint-docs)	04 Mar 2017 01:16AM UTC		Travis Job 1489.4
6	1489.6 (TOX_ENV=py27)	04 Mar 2017 01:34AM UTC	74.6	Travis Job 1489.6

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