Ran
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Files
236
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Run time
11s
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<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/d5e5082e38a961a7b925f2ce928bdb1ee6c8955b">d5e5082e3<a href="https://github.com/bigdatagenomics/adam/commit/d5e5082e38a961a7b925f2ce928bdb1ee6c8955b">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/fe8a2f2419f57dc80cc8e893116d3c832969861b">fe8a2f241</a>">fe8a2f241</a><a href="https://github.com/bigdatagenomics/adam/commit/d5e5082e38a961a7b925f2ce928bdb1ee6c8955b"> into eb4aa6ce8">eb4aa6ce8</a>
4414 of 5726 relevant lines covered (77.09%)
0.77 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | .../main/scala/org/bdgenomics/adam/cli/Vcf2ADAM.scala | 83 + 28 | 5 - 27 | 0 - 10 | 5 - 17 | 0.0 - 1.0 | |
0.0 | .../main/scala/org/bdgenomics/adam/cli/ADAM2Vcf.scala | 101 | 6 | 0 | 6 | 0.0 | |
0.0 | ...onsensus/ConsensusGeneratorFromSmithWaterman.scala | 92 | 15 | 0 | 15 | 0.0 | |
0.0 | .../main/scala/org/bdgenomics/adam/cli/FlagStat.scala | 140 | 3 | 0 | 3 | 0.0 | |
0.0 | .../bdgenomics/adam/util/ParquetFileTraversable.scala | 86 + 78 | 23 + 18 | 0 - 5 | 23 + 23 | 0.0 - 1.0 | |
0.0 | .../org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala | 179 | 1 - 17 | 0 - 9 | 1 - 8 | 0.0 - 1.0 | |
0.0 | ...adam/rdd/read/recalibration/ObservationTable.scala | 156 | 5 - 5 | 0 | 5 - 5 | 0.0 | |
0.0 | ...nomics/adam/rdd/read/recalibration/Covariate.scala | 140 | 3 - 11 | 0 | 3 - 11 | 0.0 | |
0.0 | ...s/adam/rdd/read/recalibration/CycleCovariate.scala | 56 | 13 | 0 | 13 | 0.0 | |
0.0 | ...main/scala/org/bdgenomics/adam/cli/PrintADAM.scala | 107 | 2 | 0 | 2 | 0.0 |