4
82%
main: 82%

Ran 02 Jun 2026 08:37PM UTC

Files 34

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Committed 02 Jun 2026 08:34PM UTC coverage: 81.499% (+0.03%) from 81.469%

Job # 26846403025.4

Build Type

push

github

Committed by

web-flow

Commit Message

Scoring hardening (#144): exclude receptor genes, per-condition z-score baseline (#151)

- Reject signatures containing TCR/Ig receptor segment genes
  (TRAV/TRBV/.../IGHV/IGKC...) — RECEPTOR_GENE_RE + is_receptor_gene +
  strip_receptor_genes. Receptor transcripts are clonally confounded and
  must never enter an expression signature.
- score_signature gains a 'groups' param: per-condition z-score baseline
  (each gene standardized within group), mutually exclusive with background.
- build_signature_methods gains 'background_by' to derive groups from an
  obs column (e.g. sample).
- Bump 2.20.0.

Coverage Stats

7947 of 9751 relevant lines covered (81.5%)

0.81 hits per line

pirl-unc / tcrsift / 26846403025 / 4
82%
main: 82%

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Source Files on job python-3.9 - 26846403025.4

pirl-unc / tcrsift / 26846403025 / 4 82% main: 82%

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Markdown

Textile

RDoc

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Rst

Source Files on job python-3.9 - 26846403025.4

pirl-unc / tcrsift / 26846403025 / 4
82%
main: 82%

README BADGES
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