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Ran 14 May 2026 02:28PM UTC

Files 60

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Committed 14 May 2026 02:23PM UTC coverage: 93.592% (+0.08%) from 93.517%

Job # 25865528272.1

Build Type

Pull #183

github

Committed by

iskandr

Commit Message

read_phasing: runnable doctest, document duck-typed contract, add __repr__

- Replace the broken docstring example (referenced undefined names) with
  a doctest-runnable one built on SimpleNamespace, executed via a
  dedicated `test_docstring_examples_run` test.
- Add a module-level "Contract" section spelling out the three
  attributes the adapter reads from each input result. This is intended
  as the basis for the matching `ReadPhasingSource` protocol on the
  varcode side.
- Note the symmetry guarantee inherited from
  `compute_phasing_counts` / `threshold_phased_variant_counts`.
- Add `__repr__` for friendlier debugging.

Pull Request Pull Request #183: Add IsovarReadPhasing adapter for RNA-read variant phasing

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2556 of 2731 relevant lines covered (93.59%)

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master: 94%

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