3
94%
master: 94%

Ran 16 Apr 2026 03:50AM UTC

Files 55

Run time 1s

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Committed 16 Apr 2026 03:45AM UTC coverage: 93.077% (+0.009%) from 93.068%

Job # 24490911586.3

Build Type

push

github

Committed by

web-flow

Commit Message

Add max_assembly_sequences circuit breaker to iterative_overlap_assembly (#156)

When the number of variant sequences after substring collapse exceeds
max_assembly_sequences (default 1000), skip the O(n^2)-per-round greedy
merge and return sequences sorted by read support. This prevents silent
hangs on high-coverage loci.

Three new tests: breaker triggers above threshold, disabled with None,
normal merge below threshold.

Fixes #151

Coverage Stats

2057 of 2210 relevant lines covered (93.08%)

0.93 hits per line

openvax / isovar / 24490911586 / 3
94%
master: 94%

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Markdown

Textile

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Source Files on job 24490911586.3

openvax / isovar / 24490911586 / 3
94%
master: 94%

README BADGES
x