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Ran 11 Apr 2026 04:37PM UTC

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Committed 11 Apr 2026 04:29PM UTC coverage: 86.339% (+0.9%) from 85.423%

Job # 24286686721.1

Build Type

Pull #107

github

Committed by

iskandr

Commit Message

Expand test suite: fill coverage gaps, add allele diversity, bump to 4.10.0

New test files:
- test_sequence_helpers.py: direct tests for protein_subsequences_around_mutations
- test_cli_coverage.py: tests for _apply_exclusion, genome_from_args, best_transcript, RNA expression dict helpers
- test_predictor_internals.py: tests for _format_prediction_df and _attach_expression_data edge cases
- test_edge_case_fixtures.py: empty files, malformed CSVs, missing columns, long sequences

Modified tests:
- test_end_to_end.py: parameterize input-format tests, add mouse H-2 and Class II DQ allele coverage
- test_integration.py: vary default allele to A0301
- test_sources.py: vary default allele to A*03:01

Pull Request Pull Request #107: Expand test suite and bump to 4.10.0

Coverage Stats

2073 of 2401 relevant lines covered (86.34%)

0.86 hits per line

openvax / topiary / 24286686721 / 1
86%
master: 90%

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Source Files on job python-3.10 - 24286686721.1

openvax / topiary / 24286686721 / 1 86% master: 90%

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Markdown

Textile

RDoc

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Source Files on job python-3.10 - 24286686721.1

openvax / topiary / 24286686721 / 1
86%
master: 90%

README BADGES
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