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Clinical-Genomics / trailblazer / 6097672874 / 1
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DEFAULT BRANCH: master
Ran 06 Sep 2023 01:20PM UTC
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06 Sep 2023 01:19PM UTC coverage: 76.212% (+0.1%) from 76.102%
6097672874.1

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Add config model (#272) (major)


### Added

- ANALYSIS_HOST to dockerfile to enable setting it at runtime
- Add and use Pydantic Config model for CLI input
- Tests

### Changed

- Use `trailblazer_db` instead of  ´trailblazer` in click.context
- Remove `database` from click.context as it was not used
- Remove `database` CLI option
- Refactor `database` in config to `database_url`
- Require config option on CLI
- Use ANALYSIS_HOST when using SSH

990 of 1299 relevant lines covered (76.21%)

0.76 hits per line

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