wwu-mmll / confound_corrected_cpm
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Release 0.5.0: connected-component/presence edge filters, brain-plot selector, GPU + RepeatedKFold fixes

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>

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Builds Branch Commit Type Ran Committer Via Coverage
32984891060 develop Release 0.5.0: connected-component/presence edge filters, brain-plot selector, GPU + RepeatedKFold fixes Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com> push NilsWinter github
86.33
29938025876 develop Brain-plot selector, connected-component selection, GPU benchmark + VRAM fix Features - Brain & Edges report: default to significantly stable edges (NBS/TFCE p<0.05) and add a self-contained button group to switch the matrix/hub/chord views b... push NilsWinter github
86.33
29932827040 develop Add presence filter, fix GPU + RepeatedKFold bugs, remove dead code Features - Edge selection: new `presence_filter` (bool/float) on UnivariateEdgeSelection keeps only edges nonzero in >= a fraction of subjects, for dropping structural zeros ... push NilsWinter github
85.95
28588670492 develop Release 0.4.2: opt-in network marker for atlas generator tests Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com> push NilsWinter github
84.75
28588676762 main Merge develop for 0.4.2 release push NilsWinter github
84.75
28587807377 develop Add whole-brain atlas variants (cortical + subcortical) Several bundled parcellations are cortical by design (Glasser HCP-MMP, Desikan-Killiany, Destrieux) or ship a cortical-only version (Harvard-Oxford). This adds *WholeBrain variants that appe... push NilsWinter github
84.75
28585783142 develop docs: document custom and built-in brain atlases Add a "Brain Atlases" user-docs page covering the single `atlas` parameter (built-in name or custom CSV path), a table of the 16 bundled atlases with node counts / network availability / coverage, ... push NilsWinter github
84.75
28583601537 develop Add Desikan-Killiany atlas (68 regions) via ENIGMA conte69 surface Bundles the DK FreeSurfer surface atlas as MNI-space coordinates, closing the last gap from the atlas design note (16 atlases total). ENIGMA ships DK as a per-vertex label vector ... push NilsWinter github
84.75
28577330990 develop Add built-in atlas registry with 15 bundled MNI coordinate sets Users can now select an atlas by name (e.g. atlas="Schaefer100-17") instead of hand-building a coordinate CSV. A single `atlas` parameter accepts either a built-in name or a path to ... push NilsWinter github
84.75
28551407101 develop Release 0.4.1: increment baseline & TFCE rounding fixes, dead-code cleanup Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com> push NilsWinter github
83.6
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