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pirl-unc / mhcgnomes
89%

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DEFAULT BRANCH: main
Repo Added 27 Mar 2024 05:11AM UTC
Token PunHWfSsDHCKu2IcNBx1mVoOFlcxL1Pgz regen
Build 250 Last
Files 38
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LAST BUILD ON BRANCH main
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  • main
  • 3.18.0-mhcseqs-wishlist
  • add-agents-md
  • add-intermediate-clade-nodes
  • add-mkdocs-gh-pages
  • add-species-and-gene-aliases
  • add-species-fix-genes
  • add-unknown-species-batch
  • archosaur-gene-expansion
  • batch-add-species-v3-23
  • batch-species-and-genes
  • batch-species-intermediate-taxa
  • combined-v3.12.0
  • curate-more-mhcseqs-obvious-cases
  • docs-links-and-references
  • docs-pages-release-artifacts
  • docs-reorg-v3.14.1
  • fill-clade-gaps-numbered-loci
  • finish-todo-list
  • fix-class2-pairing-non-human
  • fix-gene-class-misannotations
  • fix-mhc-roman-numeral-and-dot-aliases
  • fix-mhcseqs-parse-failures
  • fix-mhcseqs-residual-patterns
  • fix-missing-allele-ontology
  • fix-parsing-bugs-v3.30.0
  • fix-remaining-gene-gaps
  • fix-remaining-genes
  • fix-remaining-parser-leaks
  • fix-species-strict-v3.9.1
  • fix-sticky-species-parsing
  • fix-tree-gaps-v3.12.1
  • immutable-data-objects
  • ingest-mhcseqs-genes
  • mhcseqs-gap-compat
  • more-species-and-aliases
  • normalize-allele-field-widths
  • novel-prefix-4x4-standard
  • ontology-audit-fixes
  • ontology-cleanup
  • ontology-provenance-dedup
  • paper-scraping-tools
  • parse-mouse-mhc-class2-variants
  • plan-nonmammal-mhc-expansion
  • preserve-wip-app-and-tasks
  • release-on-tag-trusted-publishing
  • saha-dft2-alleles
  • species-latin-name-identity
  • taxonomy-cleanup-v3.13.0
  • todo-cleanup-and-chicken
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  • v3.14.0-species-genes
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13 May 2026 07:27PM UTC coverage: 89.226%. Remained the same
25821479785

push

github

iskandr
test.sh: memory-aware pytest-xdist worker count

Mirror the worker-cap logic from trufflepig/hitlist/tsarina/vaxrank
so concurrent test runs across sibling repos can't fork-bomb the
laptop. Picks min(cpu_reserve, available_RAM / PER_WORKER_GB),
reserves 1-2 cores, falls back to serial pytest when xdist isn't
installed, logs inputs so the chosen worker count is auditable.

3586 of 4019 relevant lines covered (89.23%)

0.89 hits per line

Relevant lines Covered
Build:
Build:
4019 RELEVANT LINES 3586 COVERED LINES
0.89 HITS PER LINE
Source Files on main
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  • Changed 0
  • Source Changed 0
  • Coverage Changed 0
Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
25821479785 main test.sh: memory-aware pytest-xdist worker count Mirror the worker-cap logic from trufflepig/hitlist/tsarina/vaxrank so concurrent test runs across sibling repos can't fork-bomb the laptop. Picks min(cpu_reserve, available_RAM / PER_WORKER_GB), re... push 13 May 2026 07:31PM UTC iskandr github
89.23
24614289052 main Add Golden Rules to AGENTS.md and bump to 3.32.1 (#81) Prepends the cross-repo Golden Rules (feature branches, version bump per PR, merge+deploy, issue triage) so coding agents see them at the top of the file. push 18 Apr 2026 09:33PM UTC web-flow github
89.23
24329289549 main Bump version to 3.32.0 for Saha DFT2 paper name support push 13 Apr 2026 06:41AM UTC iskandr github
89.23
24329265043 main Merge pull request #79 from pirl-unc/saha-dft2-alleles Parse Saha class I allele names from DFT2 paper (issue #78) push 13 Apr 2026 06:41AM UTC web-flow github
89.23
24206966596 main Update README: fix stale language about allele field normalization push 09 Apr 2026 06:40PM UTC iskandr github
89.23
24205997188 main Merge pull request #77 from pirl-unc/fix-gene-class-misannotations Fix 4 gene class misannotations with literature references (v3.31.1) push 09 Apr 2026 06:18PM UTC web-flow github
89.23
24204937745 main Fix ruff formatting in pair.py; update AGENTS.md deploy instructions push 09 Apr 2026 05:53PM UTC iskandr github
89.23
24204061777 main Merge pull request #76 from pirl-unc/fix-class2-pairing-non-human Generalize infer_class2_pairing to all species (v3.31.0) push 09 Apr 2026 05:33PM UTC web-flow github
89.23
24168694467 main Merge pull request #75 from pirl-unc/fix-parsing-bugs-v3.30.0 Fix H2-AA/AB1, RT1-B parsing bugs; add Nibea species (v3.30.0) push 09 Apr 2026 02:13AM UTC web-flow github
89.16
24146926310 main Ontology cleanup: fix erroneous genes, remove redundancy, add chains (v3.29.1) (#71) * Ontology cleanup: fix erroneous genes, remove redundancy, add chains (v3.29.0) Erroneous gene fixes: - Remove Ctenomys DRB01-04 (allele lineages, not loci; DR... push 08 Apr 2026 04:40PM UTC web-flow github
89.15
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